KrakenParser is a collection of scripts designed to process Kraken2 reports and convert them into CSV format. This pipeline extracts taxonomic abundance data at six levels: After the pipeline finishes ...

As promised last time, this time I will summarize 10 things you can actually do using Python. When I first heard of Python, I thought, 'I've heard of it, but I don't think I could master it,' and I ...

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At the end of every month, there is a task that I always dread. Gathering numbers from multiple Excel files, copying them into a single summary sheet, converting it to PDF, and sending it via email.

Cleaning massive, disorganized spreadsheets or parsing through thousands of lines of raw server logs is annoying. You can do it yourself, make a program to do it, or you can just give it to Claude and ...