Single-cell RNA-seq AI analysis has become the default way to make sense of the millions of expression measurements a single experiment can now generate. Turning raw sequencing counts into ...

For publications, please cite the following paper: Almansi, M., R. Gelderloos, T. W. N. Haine, A. Saberi, and A. H. Siddiqui (2019). OceanSpy: A Python package to ...

Molecular Biophysics and Structural Biology Graduate Program, University of Pittsburgh and Carnegie Mellon University, Pittsburgh, Pennsylvania 15260, United States Department of Structural Biology, ...

sourmash is a tool for biological sequence analysis and comparisons. sourmash compare and sourmash plot produce basic distance matrix plots that are useful for comparing and visualizing the ...

Matplotlib is a versatile 2D plotting library that provides an array of visualization options. Whether it's line plots, scatter plots, bar plots, or even 3D plots, Matplotlib has you covered. Its ...

Python is a high-level programming language that is widely used for Machine Learning (ML) applications. It is known for its readability, versatility and ease of use, making it an ideal choice for ...

Reduced-dimension or spatial in situ scatter plots are widely employed in bioinformatics papers analyzing single-cell data to present phenomena or cell-conditions of interest in cell groups. When ...