clinker is a pipeline for easily generating publication-quality gene cluster comparison figures. Given a set of GenBank files, clinker will automatically extract protein translations, perform global ...

Abstract: Existing distance measures for sequential data are often ineffective and inefficient, as they are not true metrics and incur quadratic time complexities with respect to sequence length. In ...

Department of Medical Biochemistry and Biophysics, Karolinska Institutet, SE-17177 Stockholm, Sweden Article Views are the COUNTER-compliant sum of full text article downloads since November 2008 ...

Abstract: This article introduces the Bayesian probabilistic fuzzy neural network (BPFNN), a unified architecture designed to overcome the challenges of conventional ...

ISEScan is a python pipeline to identify IS (Insertion Sequence) elements in genome. It includes an option to report either complete IS elements or both complete and partial IS elements. It might be a ...

Python is powerful, versatile, and programmer-friendly, but it isn’t the fastest programming language around. Some of Python’s speed limitations are due to its default implementation, CPython, being ...

At the heart of Apache Spark is the concept of the Resilient Distributed Dataset (RDD), a programming abstraction that represents an immutable collection of objects that can be split across a ...